PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN38736.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family TCP
Protein Properties Length: 156aa    MW: 17015.6 Da    PI: 6.1083
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN38736.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP99.36.9e-3122101876
         TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssaseceae 76 
                 ++++hTkv+gR RRv l+ +caar+F+L+ eLG+++ ++tieWLl+qa+p+i+++tgt           s+s++s ce+e
  KHN38736.1  22 KKDRHTKVNGRERRVLLPPLCAARVFQLTHELGYKTHGETIEWLLRQAEPSIIAATGTgilpssmvvsaSTSTPSLCEDE 101
                 79********************************************************5555555444322222333322 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.2E-2621109IPR005333Transcription factor, TCP
PROSITE profilePS5136923.1462276IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000257Molecular Functionnitrilase activity
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MASETPITLK AINTKLPSLK AKKDRHTKVN GRERRVLLPP LCAARVFQLT HELGYKTHGE  60
TIEWLLRQAE PSIIAATGTG ILPSSMVVSA STSTPSLCED ESTIGMHTNP MVVSTDNEIE  120
SKKEFLPLDL DSLANFDVEF SANEVAILQS LITKLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006591615.11e-112PREDICTED: transcription factor TCP20-like
TrEMBLA0A0B2RWI01e-112A0A0B2RWI0_GLYSO; Transcription factor TCP14
TrEMBLK7LQD21e-112K7LQD2_SOYBN; Uncharacterized protein
STRINGGLYMA11G20201.11e-111(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38193363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08330.12e-31TCP family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]